Monitoring Breast Cancer: Bringing Single-cell and Liquid Biopsy Analysis to the Cloud

Awarded To

Breast tumor genetics can change during disease progression, leading to distinct tumor cell populations that often contribute to therapeutic resistance. We propose to perform state-of-the-art, single-cell genomic sequencing on breast cancer biopsies and circulating tumor DNA (also known as liquid biopsies) to evaluate genetic changes during the course of a patient's therapy.

We will develop novel methods to integrate these data to monitor dynamic shifts in tumor composition. We also propose to create a harmonized database to store, access, and share abstracted clinical data. We will implement these solutions in the Azure cloud environment to support the cross-institutional study of tumor evolution and clinical outcomes in breast cancer. Our developments will facilitate future cross-institutional collaborations and likely produce significant opportunities for clinical translation, including biomarker discovery for improved disease surveillance.

Musqueam First Nation land acknowledegement

UBC Science acknowledges that the UBC Point Grey campus is situated on the traditional, ancestral, and unceded territory of the xʷməθkʷəy̓əm.

Learn more: Musqueam First Nation

Data Science Institute

EOS Main Building
6339 Stores Road, Room 113C
E-mail dsi.admin@science.ubc.ca

Faculty of Science

Office of the Dean, Earth Sciences Building
2178–2207 Main Mall
Vancouver, BC Canada
V6T 1Z4
UBC Crest The official logo of the University of British Columbia. Urgent Message An exclamation mark in a speech bubble. Arrow An arrow indicating direction. Arrow in Circle An arrow indicating direction. A bookmark An ribbon to indicate a special marker. Calendar A calendar. Caret An arrowhead indicating direction. Time A clock. Chats Two speech clouds. External link An arrow pointing up and to the right. Facebook The logo for the Facebook social media service. A Facemask The medical facemask. Information The letter 'i' in a circle. Instagram The logo for the Instagram social media service. Linkedin The logo for the LinkedIn social media service. Lock, closed A closed padlock. Lock, open An open padlock. Location Pin A map location pin. Mail An envelope. Mask A protective face mask. Menu Three horizontal lines indicating a menu. Minus A minus sign. Money A money bill. Telephone An antique telephone. Plus A plus symbol indicating more or the ability to add. RSS Curved lines indicating information transfer. Search A magnifying glass. Arrow indicating share action A directional arrow. Twitter The logo for the Twitter social media service. Youtube The logo for the YouTube video sharing service.